Outline of Session

Biogeosciences(B) / Paleontology(PT)
B-PT28 Paleogenomics


Short title Paleogenomics
Oral presentation
Date/Room/Chair
May 24 PM1 (13:45 - 15:15) 102A Kazuyoshi Endo 
May 24 PM2 (15:30 - 17:00) 102A Kazuyoshi Endo 
Poster presentation
Date/Room
May 24 (Core Time 10:45 - 12:15, 17:15 - 18:30)  
Contact Kazuyoshi Endo
Email endo@eps.s.u-tokyo.ac.jp
Convener Kazuyoshi Endo  / Tsuyoshi Komiya  / Naohiko Ohkouchi 
Scope Origin and evolution of life has been of particular interest to mankind. Life on Earth is a cellular system that is self-sustained based on the genetic information it contains and capable of undergoing Darwinian evolution. The genetic information is stored and maintained in the genomes, but it remains a mystery how the genome evolution is related to the organismal evolution and to the environmental changes. In this session, we discuss the interrelationships among the ancient genome sequence (reconstructed from comparative genomics of living organisms and direct characterization of ancient DNA), the phenotypes inferred based on the encoded biological functions (metabolic pathways, metallo-proteins, developmental programs, etc.), and the environments in which those ancestral organisms inhabited, from a wide variety of viewpoints, including geohistory and biohistory studies, geometallomics, microbial ecology, organic geochemistry, developmental genetics, and genome sciences.
Notes  


Time Presentation No Title Author Presenter Abstract
Oral Presentation   May 24 PM1 (13:45-15:15) 102A                              to the top
13:45 - 14:00 BPT28-01 Resurrection of ancestral genes to infer the ancient environment temperatures Satoshi Akanuma
Yoshiki Nakajima
Masami Shimada
other
Satoshi Akanuma English
14:00 - 14:15 BPT28-02 Biological methane production and anaerobic oxidation of methane Seigo Shima Seigo Shima English
14:15 - 14:30 BPT28-03 Evolution of multicellularity in cyanobacteria: molecular genetic and genomic approaches Akiko Tomitani Akiko Tomitani English
14:30 - 14:45 BPT28-04 Microbial sulfur cycle in aquatic ecosystems Manabu Fukui
Hisaya Kojima
Manabu Fukui English
14:45 - 15:00 BPT28-05 Complex evolutionary histories of actin, tubulins and elongation factor protein in Rhizaria based on Retaria hypothesis Yoshiyuki Ishitani
Sohta A. Ishikawa
Ryoma Kamikawa
other
Yoshiyuki Ishitani English
15:00 - 15:15 BPT28-06 Can molecular phylogeny of protein-coding genes provide new insights for foraminiferal morphology? Yurika Ujiie Yurika Ujiie English
Oral Presentation   May 24 PM2 (15:30-17:00) 102A                              to the top
15:30 - 15:45 BPT28-07 Amino acid sequence specifying eukaryotic species Ikuo Nakamura
MAKABE So
TAKAHASHO Hiroko
other
Ikuo Nakamura English
15:45 - 16:00 BPT28-08 Chemotaxonomy of Cretaceous plant fossils from compositions of molecular units in resistant macromolecule Ken Sawada
Kei Ikeda
Hideto Nakamura
other
Ken Sawada English
16:00 - 16:15 BPT28-09 Allopatric speciation due to 1.55 Ma isolation of the islands of Ryukyu, Japan, based on geologic and GenBank data Soichi Osozawa
John Wakabayashi
Soichi Osozawa English
16:15 - 16:30 Invited
BPT28-10
Evolution of bivalve bodyplan Hiroshi Wada Hiroshi Wada English
16:30 - 16:45 Invited
BPT28-11
An attempt to create the animal genomic data as a Linked Data TAKESHI KAWASHIMA
KOYANAGI, Ryo
GYOJYA, Fuki
TAKESHI KAWASHIMA English
16:45 - 17:00 3-min talk in an oral session
Presentation No Title Author Presenter Abstract
BPT28-P01 Paleogenomics: an overview Kazuyoshi Endo Kazuyoshi Endo English
BPT28-P02 Origin and early evolution of Metazoa: Decoding surface environmental changes by multi-isotope analyses Tsuyoshi Komiya Tsuyoshi Komiya English
BPT28-P03 What nitrogenous geomolecules tell about Earth's history? Naohiko Ohkouchi Naohiko Ohkouchi English
BPT28-P04 Paleogenomics: group discussion Kazuyoshi Endo
Tsuyoshi Komiya
Naohiko Ohkouchi
Kazuyoshi Endo English


Presentation No Title Author Presenter Abstract
Poster Presentation   May 24  Core Time (10:45-12:15, 17:15-18:30)                     to the top
BPT28-P01 Paleogenomics: an overview Kazuyoshi Endo Kazuyoshi Endo English
BPT28-P02 Origin and early evolution of Metazoa: Decoding surface environmental changes by multi-isotope analyses Tsuyoshi Komiya Tsuyoshi Komiya English
BPT28-P03 What nitrogenous geomolecules tell about Earth's history? Naohiko Ohkouchi Naohiko Ohkouchi English
BPT28-P04 Paleogenomics: group discussion Kazuyoshi Endo
Tsuyoshi Komiya
Naohiko Ohkouchi
Kazuyoshi Endo English